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Immune profiling in subclinical secondary dengue-infected cases reveals adaptive immune signatures correlated to protection from severe dengue.

July 2025

Gonnella G
Libri V
Gioacchino E
Mella S
Sann S
Sorn S
Ken S
Seffer V
Ya N
Heng L
Yay C
Sakuntabhai A
Ly S
Dussart P
Duong V
Hasan M
Cantaert T

FcγRIIIa is a noncanonical costimulatory molecule for CD8 T cells.

July 2025

Kao KS
Pihlstrom NL
Niejadlik EG
Cantaert T
Ahmed R
Ravetch JV
Bournazos S

Crimean-Congo Hemorrhagic Fever Outbreak in Podor, Northern Senegal in 2022: Two Independent Emergences and Unprecedented Mortality.

July 2025

Sene O
Sagne SN
Ngom D
Bocoum M
Diallo MK
Khoulé A
Faye ET
Diop SM
Diallo I
Loucoubar C
Diallo M
Dia N
Sall Y
Diop B
Ndiaye M
Sall AA
Weidmann M
Diagne MM
Fall M
Faye O
Faye O
Simon-Lorière E
Diallo D
Barry MA
Fall G

National burden and optimal vaccine policy for Japanese encephalitis virus in Bangladesh.

July 2025

Duque MP
Paul KK
Sultana R
Ribeiro Dos Santos G
O'Driscoll M
Naser AM
Rahman M
Alam MS
Al-Amin HM
Rahman MZ
Hossain ME
Paul RC
Krainski E
Luby SP
Cauchemez S
Vanhomwegen J
Gurley ES
Salje H

Global burden of chikungunya virus infections and the potential benefit of vaccination campaigns.

July 2025

Ribeiro Dos Santos G
Jawed F
Mukandavire C
Deol A
Scarponi D
Mboera LEG
Seruyange E
Poirier MJP
Bosomprah S
Udeze AO
Dellagi K
Hozé N
Chilongola J
Nasrallah GK
Cauchemez S
Salje H

Modeling the impact of vaccine campaigns on the epidemic transmission dynamics of chikungunya virus outbreaks.

July 2025

Pérez-Estigarribia PE
Ribeiro Dos Santos G
Cauchemez S
Vazquez C
Ibarrola-Vannucci AK
Sequera G
Villalba S
Ortega MJ
Di Fabio JL
Scarponi D
Mukandavire C
Deol A
Cabello Á
Vargas E
Fernández C
León L
Salje H

Mosquito-based detection of retroviruses and arboviruses in Senegal: expanding the scope of xenosurveillance.

June 2025

Ndione MHD
Ndiaye EH
Dieng M
Diouf B
Sankhé S
Diallo D
Kane M
Sene NM
Mbanne M
Sy FA
Diop SMBS
Doukanda SFM
Sall AA
Faye O
Dia N
Weaver SC
Faye O
Diallo M
Fall G
Gaye A
Diagne MM

Re-emergence of Crimean Congo hemorrhagic fever virus in Kedougou, south-eastern Senegal in 2023: Epidemiological and zoological investigations of the first symptomatic human case.

June 2025

Sadio BD
Ngom D
Sow B
Diagne CT
Gaye A
Khoulé A
Sène O
Faye E
Mhamadi M
Camara D
Sylla CN
Diaby FG
Traoré M
Ndiaye O
Mbaye KA
Cissé K
Diop B
Ndiaye EHM
Sall Y
Mbengue A
Sow A
Sall AA
Faye O
Faye M
Dia N
Diallo M
Diagne MM
Fall G
Diallo D

Toward a deeper understanding of dengue: novel method for quantification and isolation of envelope protein epitope-specific antibodies.

May 2025

Lay S
Bohaud C
Sorn S
Ken S
Rey FA
Ariën KK
Ly S
Duong V
Barba-Spaeth G
Auerswald H
Cantaert T

Tick Species Infesting Livestock in Three Bioclimatic Areas of Senegal: Bioecology, Prevalence of Tick Infestation, Associated Categorical Factors and Crimean-Congo Haemorrhagic Fever Virus Infection.

March 2025

Khoule A
Ngom D
Faye M
Sene O
Badji A
Ndiaye E
Fall G
Dia I
Diallo M
Diallo D

Structural insights into tecovirimat antiviral activity and poxvirus resistance.

March 2025

Vernuccio R
Martínez León A
Poojari CS
Buchrieser J
Selverian CN
Jaleta Y
Meola A
Guivel-Benhassine F
Porrot F
Haouz A
Chevreuil M
Raynal B
Mercer J
Simon-Loriere E
Chandran K
Schwartz O
Hub JS
Guardado-Calvo P

Antiviral activity of tecovirimat against monkeypox virus clades 1a, 1b, 2a, and 2b.

March 2025

Postal J
Guivel-Benhassine F
Porrot F
Grassin Q
Crook JM
Vernuccio R
Caro V
Vanhomwegen J
Guardado-Calvo P
Simon-Lorière E
Dacheux L
Manuguerra JC
Schwartz O

miRNome analysis reveals mir-155-5p as a protective factor to dengue infection in a resistant Thai cohort.

February 2025

Casadémont I
Ayala-Suárez R
Modhiran N
Tawfik A
Prot M
Paul R
Simon-Lorière E
Díez-Fuertes F
Ubol S
Alcamí J
Sakuntabhai A

Burden of rodent-borne viruses in rodents and zoonotic risk in human in Cambodia: a descriptive and observational study.

February 2025

Guillebaud J
Nouhin J
Hul V
Hoem T
Yanneth O
Sim M
Khun L
Phalla Y
Ken S
Pum L
Lim R
Meng C
Chhel K
Nuon S
Hoem S
Nguon K
Chan M
Ly S
Karlsson EA
Reynes JM
Sakunthabhai A
Dussart P
Duong V

RSero: A user-friendly R package to reconstruct pathogen circulation history from seroprevalence studies.

February 2025

Hozé N
Pons-Salort M
Metcalf CJE
White M
Salje H
Cauchemez S

Spatiotemporal evolution and transmission dynamics of Alpha and Delta SARS-CoV-2 variants contributing to sequential outbreaks in Cambodia during 2021.

November 2024

Su YCF
Zeller MA
Ou TP
Ma J
Pum L
Zhang R
Rath S
Heang V
Kol S
Lim R
Chea KL
Khun L
Heng L
Krang S
Raftery P
Kinzer MH
Ieng V
Kab V
Patel S
Sar B
Horm VS
Yann S
Auerswald H
Siegers JY
Troupin C
Boukli N
Vandelannoote K
Wong FY
Ng GGK
Chan M
Sorn S
Sengdoeurn Y
Heng S
Darapheak C
Savuth C
Khalakdina A
Ly S
Baril L
Spiegel A
Duong V
Ly S
Smith GJD
Karlsson EA

Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe.

November 2024

Bratuleanu BE
Chretien D
Bigot T
Regnault B
Pérot P
Savuta G
Eloit M
Temmam S

Zika virus T-cell based 704/DNA vaccine promotes protection from Zika virus infection in the absence of neutralizing antibodies.

October 2024

Roth C
Pitard B
Levillayer L
Lay S
Vo HTM
Cantaert T
Sakuntabhai A

Review of dengue vectors in Cambodia: distribution, bionomics, vector competence, control and insecticide resistance.

October 2024

Doeurk B
Marcombe S
Maquart PO
Boyer S

Antigenic sin and multiple breakthrough infections drive converging evolution of COVID-19 neutralizing responses.

September 2024

Paciello I
Pierleoni G
Pantano E
Antonelli G
Pileri P
Maccari G
Cardamone D
Realini G
Perrone F
Neto MM
Pozzessere S
Fabbiani M
Panza F
Rancan I
Tumbarello M
Montagnani F
Medini D
Maes P
Temperton N
Simon-Loriere E
Schwartz O
Rappuoli R
Andreano E

Zanamivir and baloxavir combination to cure persistent influenza and coronavirus infections after hematopoietic stem cell transplant.

September 2024

Euzen V
Xhaard A
Berreira-Ibraim S
Deville L
Quentin A
De Lima Prata PH
Gournay V
Prot M
Rahou Y
Barbet M
Mercier-Delarue S
Peffault De La Tour R
Simon-Loriere E
Legoff J

Crimean-Congo haemorrhagic fever outbreak in Northern Senegal in 2022: Prevalence of the virus in livestock and ticks, associated risk factors and epidemiological implications.

September 2024

Ngom D
Khoulé A
Faye ET
Sène O
Diop SM
Sagne SN
Diallo MK
Dia M
Barry MA
Diaw Y
Bocoum M
Ndiaye EHM
Sall Y
Diop B
Faye O
Faye O
Diallo M
Simon-Lorière E
Sakuntabhai A
Fall G
Diallo D

Re-Emergence of Rift Valley Fever Virus Lineage H in Senegal in 2022: In Vitro Characterization and Impact on Its Global Emergence in West Africa.

June 2024

Sene O
Sagne SN
Bob NS
Mhamadi M
Dieng I
Gaye A
Ba H
Dia M
Faye ET
Diop SM
Sall Y
Diop B
Ndiaye M
Loucoubar C
Simon-Lorière E
Sakuntabhai A
Faye O
Sall AA
Diallo D
Dia N
Faye O
Diagne MM
Fall M
Ndione MHD
Barry MA
Fall G

Genomic characterization of a reemerging Chikungunya outbreak in Kedougou, Southeastern Senegal, 2023.

December 2024

Dieng I
Sadio BD
Gaye A
Sagne SN
Ndione MHD
Kane M
Diallo MK
Sow B
Sankhe S
Sene O
Diallo A
Dieng M
Doukanda SFM
Mbanne M
Diop SMBS
Balde D
Ndiaye M
Sow KD
Diarra M
Sam A
Mbaye A
Diallo B
Sall Y
Faye O
Diop B
Sow A
Sall AA
Loucoubar C
Dia N
Faye O
Diallo D
Fall G
Weaver SC
Barry MA
Diallo M
Diagne MM

Increased frequencies of highly activated regulatory T cells skewed to a T helper 1-like phenotype with reduced suppressive capacity in dengue patients.

June 2024

Sann S
Heng B
Vo HTM
Arroyo Hornero R
Lay S
Sorn S
Ken S
Ou TP
Laurent D
Yay C
Ly S
Dussart P
Duong V
Sakuntabhai A
Kleinewietfeld M
Cantaert T

Reemergence of Sylvatic Dengue Virus Serotype 2 in Kedougou, Senegal, 2020.

April 2024

Dieng I
Diarra M
Sadio BD
Sow B
Gaye A
Diallo A
Faye M
Ndione MHD
Diallo D
Sankhe S
Ndiaye M
Danfakha F
Diop B
Sall AA
Fall G
Faye O
Loucoubar C
Faye O
Weaver SC
Diallo M
Barry MA
Diagne MM

Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion

March 2024

Delphine Planas
Isabelle Staropoli
Vincent Michel
Frederic Lemoine
Flora Donati
Matthieu Prot
Francoise Porrot
Florence Guivel-Benhassine
Banujaa Jeyarajah
Angela Brisebarre
Océane Dehan
Léa Avon
William Henry Bolland
Mathieu Hubert
Julian Buchrieser
Thibault Vanhoucke
Pierre Rosenbaum
David Veyer
Hélène Péré
Bruno Lina
Sophie Trouillet-Assant
Laurent Hocqueloux
Thierry Prazuck
Etienne Simon-Loriere
Olivier Schwartz

Emergence of Crimean-Congo Hemorrhagic Fever Virus in Eastern Senegal in 2022.

February 2024

Sene O
Sagne SN
Ngom D
Diagne MM
Badji A
Khoulé A
Ndiaye EH
Sankhe S
Loucoubar C
Diallo M
Weidmann M
Dia N
Simon-Lorière E
Sall Y
Diop B
Ndiaye M
Sakuntabhai A
Sall AA
Faye O
Faye O
Diallo D
Barry MA
Fall G

SARS-CoV-2 BA.2.86 enters lung cells and evades neutralizing antibodies with high efficiency.

February 2024

Zhang L
Kempf A
Nehlmeier I
Cossmann A
Richter A
Bdeir N
Graichen L
Moldenhauer AS
Dopfer-Jablonka A
Stankov MV
Simon-Loriere E
Schulz SR
Jäck HM
Čičin-Šain L
Behrens GMN
Drosten C
Hoffmann M
Pöhlmann S

Balancing functions of regulatory T cells in mosquito-borne viral infections.

January 2024

Sann S
Kleinewietfeld M
Cantaert T

High fusion and cytopathy of SARS-CoV-2 variant B.1.640.1.

January 2024

Bolland W
Michel V
Planas D
Hubert M
Staropoli I
Guivel-Benhassine F
Porrot F
N'Debi M
Rodriguez C
Fourati S
Prot M
Planchais C
Hocqueloux L
Simon-Lorière E
Mouquet H
Prazuck T
Pawlotsky J-M
Bruel T
Schwartz O
Buchrieser J

In Vitro and In Vivo Neutralizing Efficacy of Monoclonal Antibodies Against Sars-Cov-2 Variants in Kidney Transplant Recipients.

January 2024

Benotmane I
Jungbauer-Groznica M
Staropoli I
Planas D
Dehan O
Brisebarre A
Simon-Loriere E
Fafi-Kremer S
Schwartz O
Bruel T
Caillard S

Escape of SARS-CoV-2 Variants KP.1.1, LB.1, and KP3.3 From Approved Monoclonal Antibodies.

January 2024

Planas D
Staropoli I
Planchais C
Yab E
Jeyarajah B
Rahou Y
Prot M
Guivel-Benhassine F
Lemoine F
Enouf V
Simon-Loriere E
Mouquet H
Rameix-Welti MA
Schwartz O

In-vitro assessment of cutaneous immune responses to aedes mosquito salivary gland extract and dengue virus in Cambodian individuals.

January 2024

Guerrero D
Lay S
Piv E
Chhin C
Leng S
Meng R
Mam KE
Pean P
Vantaux A
Boyer S
Missé D
Cantaert T

Unraveling the intricacies of host-pathogen interaction through single-cell genomics.

January 2024

Gioacchino E
Vandelannoote K
Ruberto AA
Popovici J
Cantaert T

TMPRSS2 is a functional receptor for human coronavirus HKU1.

December 2023

Saunders N
Fernandez I
Planchais C
Michel V
Rajah MM
Baquero Salazar E
Postal J
Porrot F
Guivel-Benhassine F
Blanc C
Chauveau-Le Friec G
Martin A
Grzelak L
Oktavia RM
Meola A
Ahouzi O
Hoover-Watson H
Prot M
Delaune D
Cornelissen M
Deijs M
Meriaux V
Mouquet H
Simon-Lorière E
van der Hoek L
Lafaye P
Rey F
Buchrieser J
Schwartz O

APOBEC3F Is a Mutational Driver of the Human Monkeypox Virus Identified in the 2022 Outbreak.

November 2023

Suspène R
Raymond KA
Boutin L
Guillier S
Lemoine F
Ferraris O
Tournier JN
Iseni F
Simon-Lorière E
Vartanian JP

Untargeted metagenomic sequencing identifies Toscana virus in patients with idiopathic meningitis, southern Spain, 2015 to 2019.

November 2023

Gámbaro F
Pérez AB
Prot M
Agüera E
Baidaliuk A
Sánchez-Seco MP
Martínez-Martínez L
Vázquez A
Fernandez-Garcia MD
Simon-Loriere E

Sotrovimab therapy elicits antiviral activities against Omicron BQ.1.1 and XBB.1.5 in sera of immunocompromised patients.

October 2023

Bruel T
Vrignaud LL
Porrot F
Staropoli I
Planas D
Guivel-Benhassine F
Puech J
Prot M
Munier S
Bolland WH
Soulié C
Zafilaza K
Lusivika-Nzinga C
Meledge ML
Dorival C
Molino D
Péré H
Yordanov Y
Simon-Lorière E
Veyer D
Carrat F
Schwartz O
Marcelin AG
Martin-Blondel G

Longitudinal Study of Viral Diversity Associated with Mosquito Species Circulating in Cambodia.

August 2023

Mohamed Ali S
Rakotonirina A
Heng K
Jacquemet E
Volant S
Temmam S
Boyer S
Eloit M

Enhanced neutralization escape to therapeutic monoclonal antibodies by SARS-CoV-2 omicron sub-lineages

April 2023

Franck Touret
Emilie Giraud
Jérôme Bourret
Flora Donati
Jaouen Tran-Rajau
Jeanne Chiaravalli
Frédéric Lemoine
Fabrice Agou
Etienne Simon-Lorière
Sylvie van der Werf
Xavier de Lamballerie

Tocilizumab-treated convalescent COVID-19 patients retain the cross-neutralization potential against SARS-CoV-2 variants

March 2023

Camille Chauvin
Laurine Levillayer
Mathilde Roumier
Hubert Nielly
Claude Roth
Anupama Karnam
Srinivasa Reddy Bonam
Anne Bourgarit
Clement Dubost
Aurore Bousquet
Sebastien Le Burel
Raphaele Mestiri
Damien Sene
Joris Galland
Marc Vasse
Matthieu Groh
Mathilde Le Marchand
Camille Vassord-Dang
Jean-François Gautier
Nhan Pham-Thi
Christiane Verny
Bruno Pitard
Cyril Planchais
Hugo Mouquet
Richard Paul
Etienne Simon-Loriere
Jagadeesh Bayry
Laurent Gilardin
and Anavaj Sakuntabhai

Aerosol exposure of live bird market workers to viable influenza A/H5N1 and A/H9N2 viruses, Cambodia.

March 2023

Horwood PF
Horm SV
Yann S
Tok S
Chan M
Suttie A
Y P
Rith S
Siegers JY
San S
Davun H
Tum S
Ly S
Tarantola A
Dussart P
Karlsson EA

Resistance of Omicron subvariants BA.2.75.2, BA.4.6, and BQ.1.1 to neutralizing antibodies.

February 2023

Planas D
Bruel T
Staropoli I
Guivel-Benhassine F
Porrot F
Maes P
Grzelak L
Prot M
Mougari S
Planchais C
Puech J
Saliba M
Sahraoui R
Fémy F
Morel N
Dufloo J
Sanjuán R
Mouquet H
André E
Hocqueloux L
Simon-Loriere E
Veyer D
Prazuck T
Péré H
Schwartz O

One assay to test them all: Multiplex assays for expansion of respiratory virus surveillance.

January 2023

Boukli N
Flamand C
Chea KL
Heng L
Keo S
Sour K
In S
Chhim P
Chhor B
Kruy L
Feenstra JDM
Gandhi M
Okafor O
Ulekleiv C
Auerswald H
Horm VS
Karlsson EA

Genomic epidemiology of SARS-CoV-2 in Cambodia, January 2020 to February 2021.

January 2023

Su YCF
Ma JZJ
Ou TP
Pum L
Krang S
Raftery P
Kinzer MH
Bohl J
Ieng V
Kab V
Patel S
Sar B
Ying WF
Jayakumar J
Horm VS
Boukli N
Yann S
Troupin C
Heang V
Garcia-Rivera JA
Sengdoeurn Y
Heng S
Lay S
Chea S
Darapheak C
Savuth C
Khalakdina A
Ly S
Baril L
Manning JE
Simone-Loriere E
Duong V
Dussart P
Sovann L
Smith GJD
Karlsson EA

Antibodies as drugs-a Keystone Symposia report.

January 2023

Cable J
Saphire EO
Hayday AC
Wiltshire TD
Mousa JJ
Humphreys DP
Breij ECW
Bruhns P
Broketa M
Furuya G
Hauser BM
Mahévas M
Carfi A
Cantaert T
Kwong PD
Tripathi P
Davis JH
Brewis N
Keyt BA
Fennemann FL
Dussupt V
Sivasubramanian A
Kim PM
Rawi R
Richardson E
Leventhal D
Wolters RM
Geuijen CAW
Sleeman MA
Pengo N
Donnellan FR

Investigations into SARS-CoV-2 and other coronaviruses on mink farms in France late in the first year of the COVID-19 pandemic.

January 2023

Wasniewski M
Boué F
Richomme C
Simon-Lorière E
der Werf SV
Donati F
Enouf V
Blanchard Y
Beven V
Leperchois E
Leterrier B
Corbet S
Le Gouil M
Monchatre-Leroy E
Picard-Meyer E

Duration of BA.5 neutralization in sera and nasal swabs from SARS-CoV-2 vaccinated individuals, with or without omicron breakthrough infection.

December 2022

Planas D
Staropoli I
Porot F
Guivel-Benhassine F
Handala L
Prot M
Bolland WH
Puech J
Péré H
Veyer D
Sève A
Simon-Lorière E
Bruel T
Prazuck T
Stefic K
Hocqueloux L
Schwartz O

Analysis of a Dengue Virus Outbreak in Rosso, Senegal 2021.

December 2022

Dieng I
Barry MA
Talla C
Sow B
Faye O
Diagne MM
Sene O
Ndiaye O
Diop B
Diagne CT
Fall G
Sall AA
Loucoubar C
Faye O

Temporal patterns of functional
anti‑dengue antibodies in dengue
infected individuals with different
disease outcome or infection
history

October 2022

Hoa Thi My Vo
Vinit Upasani
Heidi Auerswald
Sokchea Lay
Sotheary Sann
Axelle Vanderlinden
Sreymom Ken
Sopheak Sorn
Sowath Ly
Veasna Duong
Philippe Dussart & Tineke Cantaert

Pestilence and famine: Continuing down the vicious cycle with COVID-19.

October 2022

Hyder S
Chhem RK
Claes F
Karlsson EA

A Look inside the Replication Dynamics of SARS-CoV-2 in Blyth’s Horseshoe Bat (Rhinolophus lepidus) Kidney Cells

May 2022

Heidi Auerswald
Dolyce H. W. Low
Jurre Y. Siegers
Teyputita Ou
Sonita Kol
Saraden In
Martin Linster
Yvonne C. F. Su
Ian H. Mendenhall
Veasna Duong
Gavin J. D. Smith
Erik A. Karlsson

Editorial: Balanced and Unbalanced Immune Response to Dengue Virus in Disease Protection and Pathogenesis.

January 2022

Cantaert T
Jouvenet N
Diehl SA

Antibody fucosylation predicts disease severity in secondary dengue infection.

June 2021

Bournazos S
Vo HTM
Duong V
Auerswald H
Ly S
Sakuntabhai A
Dussart P
Cantaert T
Ravetch JV
PICREID – Institut Pasteur.
picreid@pasteur.fr
Research reported in this project was supported by the National Institute Of Allergy And Infectious Diseases of the National Institutes of Health under Award Number U01AI151758.
The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
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